A homegrown LIMS suite
The ms_lims suite of tools has been designed to provide a modular backbone for the automation and streamlining of data flow in high-throughput mass-spectrometry. Through readily extensible readers a variety of mass-spectrometry data formats can be easily input in a generic format into the system.
The DBToolkit suite
The easily extensible DBToolkit suite enables you to process existing sequence databases (such as SwissProt, IPI, TrEMBL or the NCBInr BLAST database) into specialized peptide databases for more efficient identification of COFRADIC™ gel-free proteome analysis.
The PRIDE project
This project, designed and developed during a stay at the EBI as a Marie Curie fellow aims to become a centralized proteomics data repository.
Maven distribution plugin
This plugin for the Maven project, hosted as a top-level project by Apache, allows you to automatically generate a download page for your project deliverable as well as easy download links for all dependencies. Additionally, comments given to individual versions of your project deliverable will be preserved during each subsequent generation cycle.
These applications were developed by Lennart Martens
Proteomics and bioinformatics group
VIB Department of Medical Protein Research, UGent
A. Baertsoenkaai 3, B-9000 Ghent, Belgium
Advanced Java IDE with coding assistance
& refactorings for J2ME
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